BlastStation2 is an All-in-One solution for BLAST searches.  NCBI-Blast searches can be performed with easy-to-use interface.  WU-Blast2 (Washington University Blast 2.0) search capability using the EBI server via web service1) is another feature of BlastStation2.  WU-Blast2 can find similarities NCBI-Blast cannot find.  BlastStation2 also supports standalone BLAST search on your PC.  You can download database files from NCBI ftp server and/or  create database files from your FASTA files with BlastStation2.  BlastStation2 is available for Mac OS X and Windows platforms. 
 
 

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14-day Free Trial
 

Help Page Windows
 

Help Page Mac OS X
 
 
 Features
  1. NCBI-Blast search using the EBI server.
  2. WU-Blast2 search using the EBI server.
  3. Standalone BLAST search on your PC.
  4. High performance standalone BLAST search using automatically detected available multi cores on your PC.
  5. Easy database download from NCBI ftp server to your PC.
  6. Easy database creation from your FASTA file.
  7. Easy database creation from your FASTQ file (ver. 2.72 or later).
  8. Easy database creation from compressed file (ver. 2.72 or later).
  9. Database folder location can be changed (ver. 2.72 or later).
  10. Easy multi-FASTA data submission.
  11. Easy management of BLAST search parameters, FASTA data and search results.
  12. Graphical display of search results.
  13. Summary table display of search results.
  14. Export summary table in CSV format.
  15. Export search results sequences in FASTA format.

 
   

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